PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S00547.30
Common NameWRKY33
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family WRKY
Protein Properties Length: 458aa    MW: 50762.8 Da    PI: 7.6285
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S00547.30genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.72.7e-29276334259
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                    +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+rsae++ ++++tYeg H h+
  Jcr4S00547.30 276 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAsGCPVRKQVQRSAENKAILVTTYEGYHSHP 334
                    7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-31260336IPR003657WRKY domain
SuperFamilySSF1182907.06E-27268336IPR003657WRKY domain
PROSITE profilePS5081129.011270336IPR003657WRKY domain
SMARTSM007745.4E-35275335IPR003657WRKY domain
PfamPF031069.6E-26277334IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MDSITNDNHS ISTHGKGVLI EMDFFSHHTN HKPNPPPAAD TVKKEQRDNE EEDIHTGLNL  60
LTGRTSVSDN KSLVEDGLSQ NKQGYNQRKK ELAILQAEIN QMNTENQRLK GMLNQVNHNY  120
RSLKMQLVAL TQRNQNQKPI TVPKEEVARH FLDLGKADDH TSQLIKDERS QSSAILSSPN  180
IIESMEYDST NNNNNRSPMM INSSYINEID RDISEEALVH GWIPNKVPKF NNNANASRNG  240
DNDKEEEEEK PETISTCMMR KARVSVRARS EASMISDGCQ WRKYGQKMAK GNPCPRAYYR  300
CTMASGCPVR KQVQRSAENK AILVTTYEGY HSHPLPPAAI AMASTTSAAA QMLLSGSMQS  360
QDGLTNINSS TKTFPSYPFP GVATLSASAP FPTVTLDLTH QPQVFNPLQR SQPYFLHSFA  420
SAPLVSAQAV CDTNNPSIKF SGLLRPQVDG VVTAATCS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A7e-22262338176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC4852850.0KC485285.1 Jatropha curcas WRKY transcription factor 33 (WRKY33) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012071239.20.0probable WRKY transcription factor 31
SwissprotQ9XEC38e-91WRK42_ARATH; WRKY transcription factor 42
TrEMBLS5CS660.0S5CS66_JATCU; WRKY transcription factor 33
STRINGXP_002529927.11e-131(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86634121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.15e-83WRKY family protein
Publications ? help Back to Top
  1. Xiong W, et al.
    Genome-wide analysis of the WRKY gene family in physic nut (Jatropha curcas L.).
    Gene, 2013. 524(2): p. 124-32
    [PMID:23644253]