PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Jcr4S00284.50

Organism

Jatropha curcas

Taxonomic ID

180498

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha

Family

bZIP

Protein Properties

Length: 535aa MW: 59929.3 Da PI: 9.1826

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Jcr4S00284.50	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.5	6e-08	26	58	24	56
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 24 KkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 K++e+++ ++v+ Le eN+aLk+e+eelk++ Jcr4S00284.50 26 KQQEQQHFDRRVDDLERENEALKSEIEELKQKL 58 9*****************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.4E-4	25	59	No hit	No description
SMART	SM01114	0.0019	349	393	IPR033467	Tesmin/TSO1-like CXC domain

Sequence ? help Back to Top
Protein Sequence Length: 535 aa Download sequence Send to blast
MKKPNLRSKR TSIADALPSP GIVESKQQEQ QHFDRRVDDL ERENEALKSE IEELKQKLSN 60 GSPTSIDGLP KPKEDDDSEK FRALEEQVME LKKKLSGRSQ LSAQKQNSSQ KQKNGEAGIS 120 LQDEIQKLKA QKVQLLCKIK LESVHFRLSR ASLEKEILQL KKEQRRNDYE MRKLLALNEK 180 QKLVLQRKTE EASLATKRLK ELLESPKTSG SKTRTSTGIQ GIKLELKIEE RVEEIRSEYE 240 RQMEEMADEV RKFEEEAEML RQENFRCLLQ DKEAECKVRD SELKDLKKEV ASLSNLVNQL 300 GVVRARVHTK KLDVDLVKSS VSATSSIDFM GTSESEHSGA NNAGLGKSTP RLCCSCSKKS 360 LCKTSKCECR AATGSCGIGC GCAISKCTNR AVLFIKMDNS PQQEVSQDSV HCSGSSETEK 420 GVVISLLAAT NNNCAPRRKP LHEIGNTQVN SSPIKPRQKM AGQKTATLVD FVDQSLSGPE 480 NIEGPKNAET TVVLDKPKRL TRTKRKSSST FLNAKGRAPE FYIVDKLDEV QHIEI

Sequence ? help Back to Top

Protein Sequence Length: 535 aa Download sequence Send to blast

MKKPNLRSKR TSIADALPSP GIVESKQQEQ QHFDRRVDDL ERENEALKSE IEELKQKLSN  60
GSPTSIDGLP KPKEDDDSEK FRALEEQVME LKKKLSGRSQ LSAQKQNSSQ KQKNGEAGIS  120
LQDEIQKLKA QKVQLLCKIK LESVHFRLSR ASLEKEILQL KKEQRRNDYE MRKLLALNEK  180
QKLVLQRKTE EASLATKRLK ELLESPKTSG SKTRTSTGIQ GIKLELKIEE RVEEIRSEYE  240
RQMEEMADEV RKFEEEAEML RQENFRCLLQ DKEAECKVRD SELKDLKKEV ASLSNLVNQL  300
GVVRARVHTK KLDVDLVKSS VSATSSIDFM GTSESEHSGA NNAGLGKSTP RLCCSCSKKS  360
LCKTSKCECR AATGSCGIGC GCAISKCTNR AVLFIKMDNS PQQEVSQDSV HCSGSSETEK  420
GVVISLLAAT NNNCAPRRKP LHEIGNTQVN SSPIKPRQKM AGQKTATLVD FVDQSLSGPE  480
NIEGPKNAET TVVLDKPKRL TRTKRKSSST FLNAKGRAPE FYIVDKLDEV QHIEI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	159	165	LKKEQRR

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020533653.1	0.0	kinesin-like protein KIN-4C
TrEMBL	A0A067KZ74	0.0	A0A067KZ74_JATCU; Uncharacterized protein
STRING	XP_002514044.1	0.0	(Ricinus communis)