PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Jcr4S00197.100

Common Name

JCGZ_21618, LOC105649717

Organism

Jatropha curcas

Taxonomic ID

180498

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha

Family

BES1

Protein Properties

Length: 331aa MW: 35516.4 Da PI: 8.4712

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Jcr4S00197.100	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	218.1	2e-67	2	147	1	150
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 ++++r+ptwkErEnnkrRERrRRaiaakiyaGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+e+++++g sasasp+ss++ Jcr4S00197.100 2 TSGTRMPTWKERENNKRRERRRRAIAAKIYAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPMERMDIMGGSASASPCSSYH 96 5899***************************************************************************************** PP DUF822 96 sslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvsssl 150 +sp++sy++sp sssfpsp+s+ + +++ +sl+p+l++ls+ sss+ Jcr4S00197.100 97 --------PSPCASYNPSPGSSSFPSPVSSRYTANTNGnpdaNSLIPWLKNLSSGSSSA 147 ........***************999888776557888********9977664 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.4E-67	3	141	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence Send to blast
MTSGTRMPTW KERENNKRRE RRRRAIAAKI YAGLRMYGNY KLPKHCDNNE VLKALCNEAG 60 WTVEEDGTTY RKGCKPMERM DIMGGSASAS PCSSYHPSPC ASYNPSPGSS SFPSPVSSRY 120 TANTNGNPDA NSLIPWLKNL SSGSSSASSK HPHHLYIHTG SISAPVTPPL SSPTARTPRT 180 KNDWDDPAAG PSWGGQNYPF LPSSMPSSTP PSPGRQVLPD SGWLAGIQIP QSGPSSPTFS 240 LVSRNPFGFR DEPLSGAGSR MWTPGQSGTC SPAVPAGVDQ TADVPMADSI ASEFAFGSNT 300 GGLVKPWEGE RIHEECVSDD LELTLGNSRT R

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	2e-24	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	2e-24	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	2e-24	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	2e-24	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00248	DAP	Transfer from AT1G78700	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012091843.1	0.0	BES1/BZR1 homolog protein 4 isoform X1
Refseq	XP_012091844.1	0.0	BES1/BZR1 homolog protein 4 isoform X2
Swissprot	Q9ZV88	1e-139	BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBL	A0A067JBJ9	0.0	A0A067JBJ9_JATCU; Uncharacterized protein
STRING	XP_002522271.1	0.0	(Ricinus communis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2661	33	75

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-122	BES1/BZR1 homolog 4

Link Out ? help Back to Top
Entrez Gene	105649717

Publications ? help Back to Top
Zhang L, et al. Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress. PLoS ONE, 2014. 9(5): p. e97878 [PMID:24837971]