PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Jcr4S00107.30

Organism

Jatropha curcas

Taxonomic ID

180498

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha

Family

STAT

Protein Properties

Length: 334aa MW: 37039.3 Da PI: 5.4081

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Jcr4S00107.30	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	206.5	2.1e-64	25	146	1	122
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkkyp 96 ldvvl+na++q+++ + ev asLlyad+gl+vek++daeapLLisydG+ef+s+drp+kll+GrasfklkisqLsskcdnrLf+ikfe+p++ y+ Jcr4S00107.30 25 LDVVLSNAISQSINNEAEVAASLLYADNGLPVEKTSDAEAPLLISYDGIEFASSDRPSKLLHGRASFKLKISQLSSKCDNRLFCIKFELPEFGGYH 120 8********************************************************************************************* PP STAT 97 fleavskpirCisrsrntrsssltkk 122 fl+a+s+pirCisrsrn r+sslt+k Jcr4S00107.30 121 FLQAFSHPIRCISRSRNPRTSSLTWK 146 ********************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence Send to blast
MLLLQAFFSW KFCVFQASCR RIFSLDVVLS NAISQSINNE AEVAASLLYA DNGLPVEKTS 60 DAEAPLLISY DGIEFASSDR PSKLLHGRAS FKLKISQLSS KCDNRLFCIK FELPEFGGYH 120 FLQAFSHPIR CISRSRNPRT SSLTWKRPTS ASYPLNGPQP HGLDNGSVEF QQSSFHETKP 180 SPSSKRVKLG KENNYTLEQP DEECNSHACT ANQVEDAFRT RLDESPDNPE EVDNSATDSE 240 STEENNLNFK VASGGGYPIS DLTIFKYCLG GLTDRALLLK EVAASASEED LLRFAHEISL 300 YSGCSHHRDF KPGGQNSLAY QYTSIMTFGI SLDA

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020534319.1	0.0	uncharacterized protein LOC105632445
TrEMBL	A0A067KUI3	0.0	A0A067KUI3_JATCU; Uncharacterized protein
STRING	XP_002528483.1	1e-132	(Ricinus communis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF6710	30	36

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	2e-77	SH2 domain protein B