PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S00096.180
Common NameJCGZ_20463
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family ERF
Protein Properties Length: 275aa    MW: 30370.1 Da    PI: 6.757
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S00096.180genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.42.8e-16112154248
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48 
                      y+GVr+++ +g+WvAeIr p +   r r++lg+++tae Aa a++ 
  Jcr4S00096.180 112 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDL 154
                     59******9.**********954...5******************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.44E-18111146No hitNo description
Gene3DG3DSA:3.30.730.103.4E-23112156IPR001471AP2/ERF domain
SuperFamilySSF541712.22E-16112157IPR016177DNA-binding domain
PROSITE profilePS5103218.426112156IPR001471AP2/ERF domain
SMARTSM003805.3E-18112179IPR001471AP2/ERF domain
PfamPF008475.2E-11113154IPR001471AP2/ERF domain
PRINTSPR003673.2E-10113124IPR001471AP2/ERF domain
PRINTSPR003673.2E-10135151IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MTMERLHENI VPFGFTNAAD IRSSLSQLIL AGGSNTIDSI FSHCPAATTT IDSPVFEPLG  60
SSVYLRQRDL LQKFCEENKK STNSSFSRSF LTNPIQSSVG ASNYSSPNKK KLYRGVRQRH  120
WGKWVAEIRL PQNRMRVWLG TYDTAEAAAY AYDLDAKIQA ICQKVKRERA KKSAAKKNNV  180
DANISDGVKA VKLDSNSSSP SSSSISPNLV FNDNWYGELV SPTVSDDGFL MCENSASSVS  240
TECPVMAPED MEFEGCSLAR LPSFDPELIW EVLAN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012086732.11e-177ethylene-responsive transcription factor ERF061
TrEMBLA0A067JN591e-174A0A067JN59_JATCU; Uncharacterized protein
STRINGcassava4.1_012438m1e-116(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71813148
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.13e-33ERF family protein
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]