PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S00074.80
Common NameJCGZ_21848, LOC105649910
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family bZIP
Protein Properties Length: 451aa    MW: 48482 Da    PI: 8.1446
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S00074.80genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.74e-16224280460
                    XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                     kr+rr+q+NRe+ArrsR+RK+a++ eLe  v +L  e+++L  +l  ++k+++   
  Jcr4S00074.80 224 EKRARRMQSNRESARRSRRRKQAQLNELEAQVGQLRDERTTLLTRLTDINKKCDDAS 280
                    69**************************************************98655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.1E-17221285IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.9E-11221277No hitNo description
PROSITE profilePS5021711.599223275IPR004827Basic-leucine zipper domain
PfamPF001709.9E-13225277IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-10225274No hitNo description
PROSITE patternPS000360228243IPR004827Basic-leucine zipper domain
PfamPF124982.4E-29292422IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000693Biological Processpositive regulation of seed maturation
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
MNSIFSVDDF SDLIWQNPVA AHMPAMSRSA SEWELEKFLE EFPPPAHAPA SSPANGNAAA  60
PSSVSSQSTT LSKPRNVNDD VVEIEKAETP ALPLPRNRPP QLSDRSSSAA TDSEAYRASL  120
KSQLDLACAA AAKVSGLSSL AEDQRVAAKN IHSGSQVSGN GHGIPKAQVE ADGGSLRLPA  180
LTSVQRKQEV PMRQTTSGSS REDSDDDELD GDTETNEHLD PADEKRARRM QSNRESARRS  240
RRRKQAQLNE LEAQVGQLRD ERTTLLTRLT DINKKCDDAS VDNRILNANI ETLRTKVKMA  300
EDQVKRVTGL NPMLLARSNI PSLGMQFVAG QTDTSTNVAG PMQTNNNHFF HHSVPNITSG  360
AHLPGINSSV PVPNHNLTPL AANPQGDKGT NNVGGMASMQ QLTVSGRSMA DAPPLRHTQK  420
QTGPTASPAV ASPASNKGIF YASCKRIIKM K
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1237244RRSRRRKQ
2239244SRRRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012092128.10.0light-inducible protein CPRF2
TrEMBLA0A067JC430.0A0A067JC43_JATCU; Uncharacterized protein
STRINGXP_002520974.11e-178(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF136911825
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.16e-35basic leucine zipper 25
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]