PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S00022.240
Common NameJCGZ_14301, LOC105642894
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family bZIP
Protein Properties Length: 405aa    MW: 43172.3 Da    PI: 9.0235
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S00022.240genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_170.91.9e-22279341163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     ++elkrerrkq+NRe+ArrsR+RK+ae+eeL+ kv++L++eN aLk+e+++l+++++klk e+
  Jcr4S00022.240 279 DRELKRERRKQSNRESARRSRLRKQAETEELAHKVESLTSENLALKSEINQLTEKSEKLKHEN 341
                     689*********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.6E-36194IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.8E-23127258No hitNo description
Gene3DG3DSA:1.20.5.1705.8E-18272339No hitNo description
SMARTSM003387.4E-21279343IPR004827Basic-leucine zipper domain
PfamPF001701.6E-20280341IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.53281344IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-11282338No hitNo description
CDDcd147022.31E-20284333No hitNo description
PROSITE patternPS000360286301IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MGNNEEGKSS KPDKSASPAP MDQTNIHVYP DWAAMQAYYG PRVALPPYYN SAMASGHAPH  60
PYMWGPPQPM MPPYGTPYAA VYSHGGVYAH PAVPIGSHPS APGVQSSPAV GTPLNVEMPT  120
KSTGNTDRGL MKKLKGFDGL AMSIGNGNGS GNAESAEGGD RRLSLSAETE GSSDGSDGNT  180
SGGRKRSREG TPTIAGEMRS ETPASSAPSG EVNAYSDKVS GAAVTPAGFS EKSVGAVNSP  240
RMSTALELRN PPVNGAKTNA TNIPQPYAVL PSEAWIQNDR ELKRERRKQS NRESARRSRL  300
RKQAETEELA HKVESLTSEN LALKSEINQL TEKSEKLKHE NAALLEKLKN SKLGQAQETI  360
LNRSSEQRAS AVSTENLLSR VNTSASVDRN AGEESXXXXX XXXXX
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1295301RRSRLRK
2295302RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012083267.10.0common plant regulatory factor 1 isoform X1
SwissprotQ990891e-136CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A067K8C00.0A0A067K8C0_JATCU; Uncharacterized protein
STRINGcassava4.1_008459m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF53013455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-90G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]
  3. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]