PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S00002.130
Common NamebZIP60, LOC105635160
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family bZIP
Protein Properties Length: 308aa    MW: 34359.8 Da    PI: 4.4424
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S00002.130genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.92.6e-09151193446
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                     +k+ rr  +NR AA rsR+RKk+++  Le k+  Le+e ++L 
  Jcr4S00002.130 151 SKKLRRQLRNRDAAVRSRERKKMYVRDLEIKSRYLEGECRRLG 193
                     6999*********************************998875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.8E-6145212IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.6E-10146208No hitNo description
PROSITE profilePS502179.553150213IPR004827Basic-leucine zipper domain
PfamPF001701.3E-7152197IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-10152207No hitNo description
CDDcd147044.24E-17153204No hitNo description
PROSITE patternPS000360155170IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MMEDTEFQEG DIFRLVNFDD LEQLDWDNLF TGLPDGLPSL PTKSPPPIDV FNSSPDSVSS  60
WIGQLENVLM EDDDDWAAEP SLQISENFFA DILVDSPPGS AEVADASTDK DSAASDHGNS  120
GASETEKESE KIVPDRAEVK NDDEDPDDHI SKKLRRQLRN RDAAVRSRER KKMYVRDLEI  180
KSRYLEGECR RLGRLLQCFV AENQALRLSL QKDNAFGVSS AKQESAVLLL ESLLLGSLLW  240
FLGIMCLFTL PKLPHLTLVA VPLENEEKKM AEKGAGSKMV IGPLMNSRRC KASRTRMKTE  300
SISDGVLV
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF0220060.0KF022006.1 Jatropha curcas basic leucine zipper 60 (bZIP60) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001292941.10.0bZIP transcription factor 60
TrEMBLA0A0A7CBD90.0A0A0A7CBD9_JATCU; Basic leucine zipper 60
STRINGXP_002510740.11e-117(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120093032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.16e-25basic region/leucine zipper motif 60