PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc050949.1_g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | TCP | ||||||||
Protein Properties | Length: 92aa MW: 10462.8 Da PI: 9.6882 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 30.4 | 1.3e-09 | 71 | 92 | 3 | 24 |
TCP 3 gkkdrhskihTkvggRdRRvRl 24 kkdrhskihT+ g+RdRR+Rl Itr_sc050949.1_g00001.1 71 SKKDRHSKIHTAHGPRDRRMRL 92 69*******************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03634 | 1.7E-8 | 71 | 92 | IPR005333 | Transcription factor, TCP |
PROSITE profile | PS51369 | 14.551 | 72 | 92 | IPR017887 | Transcription factor TCP subgroup |
Sequence ? help Back to Top |
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Protein Sequence Length: 92 aa Download sequence Send to blast |
MQYEDEHVLL QHIHTLLLQQ EDSFAAAAAA AESAIILNSN EQYFDNSSST MMKNNSNNNN 60 VVVVGKKKKC SKKDRHSKIH TAHGPRDRRM RL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019189667.1 | 4e-37 | PREDICTED: transcription factor TEOSINTE BRANCHED 1-like isoform X2 |