PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc006808.1_g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 189aa MW: 20717.2 Da PI: 10.3005 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.3 | 3e-16 | 85 | 131 | 4 | 54 |
AP2 4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 +GVr ++ +g+W AeIrdp +r+r++lg+f++ eeA +a++ ++++e Itr_sc006808.1_g00001.1 85 PGVRKRP-WGKWCAEIRDPQ---VRRRVWLGTFDSQEEASRAYVSKKQEFE 131 7******.**********93...35*******************9998876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.09E-18 | 82 | 123 | No hit | No description |
SuperFamily | SSF54171 | 7.19E-14 | 83 | 129 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 17.161 | 83 | 143 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.3E-18 | 83 | 125 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.5E-13 | 83 | 147 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.4E-9 | 84 | 95 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.3E-10 | 85 | 131 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.4E-9 | 106 | 122 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 9.045 | 149 | 189 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence Send to blast |
MVEGETRGLR KVTIRVSDPD PYATESSSDE SDRETRPKGV VGEVFIPKSA AVAAPLTRPA 60 KDGSENVPGQ EIGSDSGSGQ AKKWPGVRKR PWGKWCAEIR DPQVRRRVWL GTFDSQEEAS 120 RAYVSKKQEF EEIARAKQGT KSKTAASILP VGVRVSKKTG KFYSELPNPT AGNRKNRLGP 180 FETAEEASQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019164614.1 | 1e-99 | PREDICTED: ethylene-responsive transcription factor ERF073-like | ||||
TrEMBL | A0A484LQG2 | 1e-29 | A0A484LQG2_9ASTE; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 5e-20 | ERF family protein |