PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc004615.1_g00002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | BES1 | ||||||||
Protein Properties | Length: 90aa MW: 10085.5 Da PI: 10.5046 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 87.7 | 3e-27 | 8 | 70 | 9 | 70 |
DUF822 9 wkErE.nnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr 70 +E+ k RER+RR +a++ aGL ++Gny+lp+ra +n+Vl+A eAG++v +DGttyr Itr_sc004615.1_g00002.1 8 KREKQmDGKIRERKRREFTARMIAGLLQHGNYNLPARASQNQVLAAVVSEAGYTVGPDGTTYR 70 4565524699****************************************************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 4.8E-25 | 8 | 71 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 90 aa Download sequence Send to blast |
MSPNPQPKRE KQMDGKIRER KRREFTARMI AGLLQHGNYN LPARASQNQV LAAVVSEAGY 60 TVGPDGTTYR PPPPSNVVST SIYYFIFLGF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 4 | 11 | PQPKREKQ |
2 | 18 | 23 | ERKRRE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019156606.1 | 2e-20 | PREDICTED: beta-amylase 8-like | ||||
Swissprot | Q9FH80 | 3e-16 | BAM8_ARATH; Beta-amylase 8 | ||||
TrEMBL | A0A443P8Y7 | 2e-19 | A0A443P8Y7_9MAGN; Beta-amylase | ||||
STRING | GLYMA01G35500.2 | 1e-18 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6204 | 21 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45300.1 | 1e-18 | beta-amylase 2 |
Publications ? help Back to Top | |||
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