PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Itr_sc003728.1_g00002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | EIL | ||||||||
Protein Properties | Length: 441aa MW: 49839.2 Da PI: 5.5236 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 377.3 | 2.5e-115 | 31 | 331 | 2 | 285 |
XXXXXXXXXXXXXXXXXXXXXX..XXXXX.........XXXXXXX........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 2 elkkrmwkdqmllkrlkerkkqlledkeaa........tgakksn........ksneqarrkkmsraQDgiLkYMlkemevcnaqG 71 elkkrmwkd+m++++lk k+++ ++ e + s+ +eq+rrkkmsr+QD+iLkYM+k+mevc+aqG Itr_sc003728.1_g00002.1 31 ELKKRMWKDRMRMQKLKAAKRRNDAAGEDDdcvlmdedS----SSsssaadaaAKQEQSRRKKMSRSQDSILKYMVKIMEVCKAQG 112 9****************9999876655555788855431....33456677779******************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHS CS EIN3 72 fvYgiipekgkpvegasdsLraWWkekvefdrngpaaisky.....qaknlilsgesslqtersseshslselqDTtlgSLLsalm 152 fvYgi+pekgkpv+g+sdsLr+WWke v+f++n+paai++ ++++ + +l+ +ss l++ qDTtlgS+Lsalm Itr_sc003728.1_g00002.1 113 FVYGIVPEKGKPVTGSSDSLRGWWKETVKFEQNAPAAIAEFlpklvS-SAAAAAAAADLHDPSSSLVYLLQDFQDTTLGSMLSALM 197 ****************************************9776542.2233333334434466777889**************** PP SSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT- CS EIN3 153 qhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkm 238 qhc ppqrrfplekg++pPWWP+Gkelwwg++gl+++qg+ppy+kphdlkkawkvsvL+a ikhms + +++r+l+ qs+ lq+km Itr_sc003728.1_g00002.1 198 QHCAPPQRRFPLEKGLAPPWWPSGKELWWGHQGLAQEQGPPPYRKPHDLKKAWKVSVLAAIIKHMSHDTDRMRRLVKQSRILQNKM 283 ************************************************************************************** PP -SHHHHHHHHHHTTTTT-S--XXXXXX.XXXXXXXXXXXXXXXXXXXX CS EIN3 239 sakesfallsvlnqeekecatvsahss.slrkqspkvtlsceqkedve 285 +ake++++++v+ qee++++ + + s+ +++++ +s+ +k + + Itr_sc003728.1_g00002.1 284 TAKETATWAKVVDQEEALLNLTHKALNiSTPDDDKQKSISQTSKLRTR 331 *****************9987777744333334444444444443333 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 2.0E-113 | 31 | 299 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 2.2E-64 | 175 | 306 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 5.75E-56 | 179 | 302 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 441 aa Download sequence Send to blast |
MVEIYDEELS PESEIMEVEE EEEEQEVSYH ELKKRMWKDR MRMQKLKAAK RRNDAAGEDD 60 DCVLMDEDSS SSSSAADAAA KQEQSRRKKM SRSQDSILKY MVKIMEVCKA QGFVYGIVPE 120 KGKPVTGSSD SLRGWWKETV KFEQNAPAAI AEFLPKLVSS AAAAAAAADL HDPSSSLVYL 180 LQDFQDTTLG SMLSALMQHC APPQRRFPLE KGLAPPWWPS GKELWWGHQG LAQEQGPPPY 240 RKPHDLKKAW KVSVLAAIIK HMSHDTDRMR RLVKQSRILQ NKMTAKETAT WAKVVDQEEA 300 LLNLTHKALN ISTPDDDKQK SISQTSKLRT REKRKRGLLV EEKEDLFGLA NSDALLAMVP 360 ESSIINSGHG EISQQLPEWI TEEIQRSFQS YHAQTSNGGL GNYYGNESVI EHQFMFDDPE 420 ACGDQTSTHE QTSIWDLAYI P |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 2e-58 | 176 | 301 | 1 | 126 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 2e-58 | 176 | 301 | 1 | 126 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 45 | 51 | LKAAKRR |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_019183639.1 | 0.0 | PREDICTED: putative ETHYLENE INSENSITIVE 3-like 4 protein | ||||
Swissprot | Q9LX16 | 1e-121 | EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein | ||||
TrEMBL | A0A1U7Y0I7 | 1e-154 | A0A1U7Y0I7_NICSY; putative ETHYLENE INSENSITIVE 3-like 4 protein | ||||
STRING | XP_009792280.1 | 1e-155 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA304 | 23 | 178 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G10120.1 | 1e-115 | EIL family protein |
Publications ? help Back to Top | |||
---|---|---|---|
|