PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc001884.1_g00005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | TCP | ||||||||
Protein Properties | Length: 180aa MW: 20315.2 Da PI: 11.1146 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 54.1 | 6.2e-17 | 3 | 70 | 7 | 73 |
TCP 7 rhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.sec 73 r+ + +++ gR+RR+Rl+ e +rfF+L + LG+ +++ t+eW l+++k++i +l + ++ ++ +++ Itr_sc001884.1_g00005.1 3 RKTNRRSSGTGRGRRIRLPGEFSKRFFELKKLLGHQRPGLTLEWRLENSKEEIEDLRSKKAVNHeNDV 70 7788999*************************************************999443331333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51369 | 13.823 | 1 | 58 | IPR017887 | Transcription factor TCP subgroup |
Pfam | PF03634 | 8.1E-15 | 13 | 87 | IPR005333 | Transcription factor, TCP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence Send to blast |
MTRKTNRRSS GTGRGRRIRL PGEFSKRFFE LKKLLGHQRP GLTLEWRLEN SKEEIEDLRS 60 KKAVNHENDV LVPSPSSSLD ESGLTTSPRR LKTVLPPFVY GMEIEMDFSP DEVARIRSRE 120 PMTPSPSGVT LWIAGSSFGW GILTNTWSTA PPGPHPPGSR AGMWPSRTRV DPLSRNLYFL |