PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc001767.1_g00002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 239aa MW: 27012.2 Da PI: 4.1701 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 33.3 | 1.4e-10 | 4 | 101 | 2 | 94 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLpkkvkaeekewyfFskrdkkya..tgkrknra...... 77 p G+rF+P d +++ ++L v+g++ +e+ i + d++ + ePw+L +++k yf ++ +kk++ +g+r +r+ Itr_sc001767.1_g00002.1 4 PLGLRFQPFDYDVI-RFLFDFVTGRSSVDDEAlICKEDVFgEKEPWELI---PSGKKMAYFLTRLKKKAKsmKGSRVQRTvgrkmm 85 89************.9999999999944445448888876267*****4...4567788998887776664468899997677777 PP NAM 78 .tksgyWkatgkdkevls 94 ksg W+ +dke + Itr_sc001767.1_g00002.1 86 gKKSGNWHG--QDKEFYL 101 7779***95..5555555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.06E-6 | 2 | 98 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence Send to blast |
MEIPLGLRFQ PFDYDVIRFL FDFVTGRSSV DDEALICKED VFGEKEPWEL IPSGKKMAYF 60 LTRLKKKAKS MKGSRVQRTV GRKMMGKKSG NWHGQDKEFY LPETIIRRAR AEFRIVEERE 120 DFVLCYIHPK KEDDDDDDEE EDDENSLEQG GTSSKDSEAT VIVEGVPVAP TDNISSYIVG 180 IPEDTIAEGV PVETLLAPPA TTDGGSYLVE TSSEPSSFMD FSELIWNIED VTTLIDFDA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 63 | 69 | LKKKAKS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019152455.1 | 4e-72 | PREDICTED: NAC domain-containing protein 83-like |