PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc000508.1_g00014.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 194aa MW: 21225.3 Da PI: 6.1629 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.2 | 4.8e-19 | 16 | 66 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 ykGVr++k++g+Wv+eIr+p r r++lg+f t+e+Aa a++ a+++l+g Itr_sc000508.1_g00014.1 16 VYKGVRRRKSSGKWVSEIREP-----RspNRIWLGTFPTPEMAAVAYDVAALALKG 66 69******************9.....4489***********************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 2.1E-12 | 16 | 66 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.326 | 16 | 74 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.7E-31 | 16 | 80 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.09E-20 | 16 | 76 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.6E-28 | 16 | 76 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.3E-7 | 17 | 28 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 8.76E-27 | 17 | 76 | No hit | No description |
PRINTS | PR00367 | 2.3E-7 | 56 | 76 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0050832 | Biological Process | defense response to fungus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
MSTRAWRSNN ESGGAVYKGV RRRKSSGKWV SEIREPRSPN RIWLGTFPTP EMAAVAYDVA 60 ALALKGPHAE LNFPNSAASL PVPASNSSRD IQEAAALAAA AAGAAADALR PAGGGHHHQV 120 DYNSGGIAAE TYEHHHQTHN EFVDEDLIFD MPNVIANMAE GMLLSPPRYQ QYSYDHYDYD 180 YASTATDHNL WNYP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 17 | 23 | KGVRRRK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019157167.1 | 3e-97 | PREDICTED: ethylene-responsive transcription factor ERF024-like | ||||
Swissprot | Q9SJR0 | 9e-55 | ERF24_ARATH; Ethylene-responsive transcription factor ERF024 | ||||
TrEMBL | A0A1S3YU88 | 1e-64 | A0A1S3YU88_TOBAC; ethylene-responsive transcription factor ERF024-like | ||||
TrEMBL | A0A1U7Y419 | 1e-64 | A0A1U7Y419_NICSY; ethylene-responsive transcription factor ERF024 | ||||
STRING | XP_009793989.1 | 2e-65 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA553 | 22 | 110 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36450.1 | 4e-42 | ERF family protein |