PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc000331.1_g00003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 181aa MW: 19720.2 Da PI: 9.4866 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.8 | 3.9e-05 | 103 | 122 | 2 | 21 |
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C+ C+++F++k++L H r Itr_sc000331.1_g00003.1 103 VCHLCKMVFTSKEELIIHGR 122 7*****************77 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence Send to blast |
MSSNAAIANA SPSGEKSPEK QPTPSRRYET RQKTPSELTL GSPSGGHGGS GRPHAGIHHS 60 KRCFLCESAA DSPKKRKRAK KATGPSAPPP SPAARPDPSQ ETVCHLCKMV FTSKEELIIH 120 GRTNFDVCNL VKFHNALYLK HEQLRQAADH EPALWYGPQT GPTMAGNFIP DLNFPPPPEY 180 Y |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 73 | 80 | KKRKRAKK |