PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc000257.1_g00022.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 348aa MW: 38279.8 Da PI: 4.1769 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 26.9 | 1.3e-08 | 6 | 102 | 2 | 88 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiy.kvePwdLpkkvkaeekewyfFskrdkkya..tgkrknra..... 77 p G+ F+P d +lv ++L + v++++ ++e i+e d++ + ePw+L ++ +e+ yf +k +kk + tg r +r+ Itr_sc000257.1_g00022.1 6 PLGLFFQPFDYDLV-RFLFEFVTATNnsADEEGLIHEEDMFgDKEPWELI-RYGPSENMAYFLTKLKKKGKlkTGCRVERTvgkkv 89 7899**********.7777777666623444456****987256*****7.66667788899998888766557889999756666 PP NAM 78 ..tksgyWkatgk 88 k g W+ + k Itr_sc000257.1_g00022.1 90 kgKKPGNWHGQDK 102 6656899997665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.72E-6 | 3 | 102 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence Send to blast |
MEMEIPLGLF FQPFDYDLVR FLFEFVTATN NSADEEGLIH EEDMFGDKEP WELIRYGPSE 60 NMAYFLTKLK KKGKLKTGCR VERTVGKKVK GKKPGNWHGQ DKVADERVLP AGDYSEESLA 120 RAKYPIVEER KDFVLCRLER KKDEEDEDED DEKTTTLEQG GKDLEVETTS PIITPSPVET 180 LTVADDDINS NLIGEETLAL TKDDMNSFLA SLAATGDTDG GHDHNISSYF DGVPVPVPVG 240 DTDISSYLDG VPVPVPVGDT DIISSYLDGV RVPVPARDTD IISSYLDGVR VPVPVPAGDT 300 DIISSYLDGV PVPVPVPAGD TDMKAQRAKS PPLRLESTPP MWSATECH |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019152455.1 | 3e-47 | PREDICTED: NAC domain-containing protein 83-like |