PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc000246.1_g00056.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | SAP | ||||||||
Protein Properties | Length: 83aa MW: 8275.06 Da PI: 6.5957 | ||||||||
Description | SAP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SAP | 73.5 | 3.1e-23 | 1 | 83 | 1 | 79 |
SAP 1 msssssssssese....egseggeggdassgesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqv 79 mssss ss ++s+ eg eg++gg + + ++ ++s+sr+r n+v+peP++eala qvaida++++Grlaaa+ala +fqv Itr_sc000246.1_g00056.1 1 MSSSSPSSTNSSSpepvEGREGSAGGVRFEAATSSSSRSRRRGGNGVLPEPIVEALACQVAIDAASNNGRLAAAPALASLFQV 83 555554443333300113333333433444777888999999****************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 83 aa Download sequence Send to blast |
MSSSSPSSTN SSSPEPVEGR EGSAGGVRFE AATSSSSRSR RRGGNGVLPE PIVEALACQV 60 AIDAASNNGR LAAAPALASL FQV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019198391.1 | 9e-23 | PREDICTED: transcriptional regulator STERILE APETALA-like | ||||
TrEMBL | A0A0B2SGI7 | 2e-13 | A0A0B2SGI7_GLYSO; Uncharacterized protein | ||||
TrEMBL | F6HHP0 | 2e-13 | F6HHP0_VITVI; Uncharacterized protein | ||||
STRING | VIT_12s0057g00910.t01 | 4e-14 | (Vitis vinifera) |