PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Itr_sc000236.1_g00008.1

Organism

Ipomoea trifida

Taxonomic ID

35884

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

BES1

Protein Properties

Length: 340aa MW: 36606 Da PI: 9.7075

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Itr_sc000236.1_g00008.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	216.9	4.6e-67	29	174	1	150
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssa 86 g+sgr ptwkErEnnkrRERrRRaiaaki+aGLRaqGnyklpk++DnneVlkALc+eAGwvv++DGttyrkg +p+ +e++g sa Itr_sc000236.1_g00008.1 29 GSSGRLPTWKERENNKRRERRRRAIAAKIFAGLRAQGNYKLPKHCDNNEVLKALCAEAGWVVDEDGTTYRKGRRPP-PTETMGISA 113 689***********************************************************************.9**** PP DUF822 87 saspesslqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsssl 150 ++s +ss+q s+ ss ++sp++sy+asp sssfpsps+ d ++ + +lp++++l++v+ssl Itr_sc000236.1_g00008.1 114 NISACSSVQPSPMSSCFPSPAPSYHASPVSSSFPSPSRGDANPP---SYILPFIHNLASVPSSL 174 *************************************987...599****99999886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	4.9E-62	30	153	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence Send to blast
MTAPGGGSSG RLXGGVCTCS SRMTAPGGGS SGRLPTWKER ENNKRRERRR RAIAAKIFAG 60 LRAQGNYKLP KHCDNNEVLK ALCAEAGWVV DEDGTTYRKG RRPPPTETMG ISANISACSS 120 VQPSPMSSCF PSPAPSYHAS PVSSSFPSPS RGDANPPSYI LPFIHNLASV PSSLPPLRIS 180 NSAPVTPPLS SPTKNSKRKP FLESLSNSSF YPSHHMLFIS SAPSSPTRRR HCKPATIPEC 240 DESDASTIDS VRWVSSQTGV PLVAPTSPTF NLVQPFSQQS TPLIGVNVHR DFDWAGAAKR 300 SRCSEFDFEN AKVMAWEGER IHDIGMDDLE LKLGSGKAHA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	1e-25	33	112	372	451	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	1e-25	33	112	372	451	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	1e-25	33	112	372	451	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	1e-25	33	112	372	451	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019182784.1	0.0	PREDICTED: BES1/BZR1 homolog protein 2-like
Swissprot	Q94A43	1e-98	BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBL	A0A484L1Q6	1e-170	A0A484L1Q6_9ASTE; Uncharacterized protein
STRING	XP_009349751.1	1e-133	(Pyrus x bretschneideri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA9486	21	28

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19350.6	1e-85	BES1 family protein