PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc000146.1_g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | G2-like | ||||||||
Protein Properties | Length: 152aa MW: 15281 Da PI: 10.5939 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 21.3 | 6e-07 | 1 | 19 | 36 | 54 |
G2-like 36 mkvkgLtlehvkSHLQkYR 54 m+v+gLt+ +v+SHLQk R Itr_sc000146.1_g00001.1 1 MNVPGLTRMQVASHLQKCR 19 9****************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 9.3E-6 | 1 | 20 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 152 aa Download sequence Send to blast |
MNVPGLTRMQ VASHLQKCRN DNWRAPEERR APPMSSASPA SGSGSRNEQR RFGTMPKLTA 60 AAAAAAAAAG GNSQQLGSTM SPEVQSSPSI TGAVTGDPSS QPPADRQYLA IGAAAAFVSK 120 LESSSPPSAA VQPAVVATAV GTFTATSGQA SI |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019176860.1 | 7e-55 | PREDICTED: two-component response regulator ORR26-like |