PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_9973.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 217aa MW: 24332.4 Da PI: 8.5168 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39 | 1.8e-12 | 16 | 61 | 4 | 49 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 k+ +rk++NR +ArrsR RK a ++eLee v L N +L l MLOC_9973.2 16 EKVNKRKESNRDSARRSRSRKAAHTKELEEQVSLLRVANNSLMRHL 61 5899***********************************9998665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.0E-10 | 13 | 77 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.875 | 15 | 65 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.39E-9 | 17 | 67 | No hit | No description |
Pfam | PF00170 | 1.6E-10 | 17 | 62 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.5E-9 | 19 | 66 | No hit | No description |
Pfam | PF12498 | 1.9E-29 | 84 | 191 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence Send to blast |
MEGEAQTIGT MNISAEKVNK RKESNRDSAR RSRSRKAAHT KELEEQVSLL RVANNSLMRH 60 LADVSHRYVN TAIDNRVLKA NVETLEAKVK MVEETMKRIT STNNFPQAIS GISSLRTHFS 120 GSQLDGIFDT TLPTQNMSLN HFSTTATNFD VSSNYIPELA PAYQIHDQIS SLHTQPMPCL 180 DHHPRRMPFG IPSTLVPTPQ RESTTLDSNE IGNMVMQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds to the DNA specific sequence 5'-GCCACGT[AC]AG-3' found in the alpha-globulin gene promoter (PubMed:9049271, PubMed:11572990). Does not bind to promoters of other major storage genes such as glutelin, prolamin and albumin (PubMed:9049271). Binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters (PubMed:11133985). {ECO:0000269|PubMed:11133985, ECO:0000269|PubMed:11572990, ECO:0000269|PubMed:9049271}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_9973.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | Y10834 | 0.0 | Y10834.1 H.vulgare mRNA for bZIP transcription factor 2. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020187696.1 | 1e-108 | light-inducible protein CPRF2-like isoform X2 | ||||
Swissprot | Q7X9A8 | 4e-35 | RSBZ2_ORYSJ; bZIP transcription factor RISBZ2 | ||||
TrEMBL | M0ZFU5 | 1e-160 | M0ZFU5_HORVV; Uncharacterized protein | ||||
STRING | MLOC_9973.1 | 1e-157 | (Hordeum vulgare) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.2 | 9e-21 | bZIP family protein |
Publications ? help Back to Top | |||
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