PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_9973.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 409aa    MW: 44697.8 Da    PI: 5.7042
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_9973.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1383.7e-12208253449
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                   k+ +rk++NR +ArrsR RK a ++eLee v  L   N +L   l
  MLOC_9973.1 208 EKVNKRKESNRDSARRSRSRKAAHTKELEEQVSLLRVANNSLMRHL 253
                  5899***********************************9998655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.0E-10205269IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.875207257IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.85E-8209259No hitNo description
PfamPF001703.3E-10209253IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.1E-9211257No hitNo description
PfamPF124986.6E-29276383IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    Send to blast
MEPVFSLLEE AMPEPDSNPG RTSPPQLQAH VLAGGVRGAG GVGVGEIVGD GAIELCFDKS  60
MEESSLLNVP TEPVANPDAS TLHPNPTAEV SRKRRYDVHE EEEVVGVIPT PPAAGAVLDP  120
VGYNAMLRRK LDAHLAAVAM WRTTRGICRQ SSHDNRASQN PDSIQGSENH TGDASVQQLS  180
SSSWEPSPSD DDMEGEAQTI GTMNISAEKV NKRKESNRDS ARRSRSRKAA HTKELEEQVS  240
LLRVANNSLM RHLADVSHRY VNTAIDNRVL KANVETLEAK VKMVEETMKR ITSTNNFPQA  300
ISGISSLRTH FSGSQLDGIF DTTLPTQNMS LNHFSTTATN FDVSSNYIPE LAPAYQIHDQ  360
ISSLHTQPMP CLDHHPRRMP FGIPSTLVPT PQRESTTLDS NEIGNMVMQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_9973.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankY108340.0Y10834.1 H.vulgare mRNA for bZIP transcription factor 2.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020187695.10.0basic leucine zipper 63-like isoform X1
TrEMBLM0ZFU40.0M0ZFU4_HORVV; Uncharacterized protein
STRINGMLOC_9973.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2520255
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.14e-22bZIP family protein