PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_8430.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | ERF | ||||||||
Protein Properties | Length: 312aa MW: 34756.7 Da PI: 4.6374 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.2 | 1.5e-11 | 113 | 162 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++G+r+++ g+W+AeI +p+++ +++ +f +aeeAa+ ++a +++++g MLOC_8430.1 113 QFQGIRQRP-LGKWAAEITHPTKD---LHVWPDTFNSAEEAARGYDAEARRIHG 162 589******.8*********9643...9************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 2.5E-21 | 113 | 171 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.79E-14 | 113 | 170 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 3.1E-19 | 113 | 176 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 17.174 | 113 | 170 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.23E-20 | 113 | 171 | No hit | No description |
PRINTS | PR00367 | 1.8E-6 | 114 | 125 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.8E-6 | 152 | 172 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence Send to blast |
MCGKVPLANS KISAVTRNVM EVTVLPEKNK PVWGSRGDRC FTGHGRRKGL RMDNDEEDFE 60 AGFGDSNMEL VRGGVAQKDD GNESLSQDDL SIMPTADFDG PSEMPKRRKR KNQFQGIRQR 120 PLGKWAAEIT HPTKDLHVWP DTFNSAEEAA RGYDAEARRI HGKKAKVNFT EKATRSTDFA 180 SNQPLVPAMN STAPVEAPVM DMYSDQGSNS FGSSDLGWEY DAKTPDISSI APTSTIAEGE 240 EFALVKNNTY NSMVPHVMEN NGVNLQPWMR YLLDDSVDKM IDSLLNFDVP QDTIVNMDLW 300 SFDDMPTGGE FF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcriptional activator that may be involved in defense signaling pathway. Binds in vitro to the DNA sequence 5'-AGCCGCC-3' of the GCC-box element found in pathogenesis-related (PR) gene promoters. The transcriptional activation is enhanced in vitro by the presence of MPK12/BWMK1. {ECO:0000269|PubMed:12913152}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_8430.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020192774.1 | 1e-135 | ethylene-responsive transcription factor 1-like | ||||
Swissprot | Q6K7E6 | 7e-87 | ERF1_ORYSJ; Ethylene-responsive transcription factor 1 | ||||
TrEMBL | M0ZE08 | 0.0 | M0ZE08_HORVV; Uncharacterized protein | ||||
STRING | MLOC_8430.3 | 0.0 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1039 | 38 | 134 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 7e-22 | ethylene-responsive element binding protein |