PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_80875.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | ERF | ||||||||
Protein Properties | Length: 323aa MW: 35830.2 Da PI: 4.8267 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 40.6 | 6.3e-13 | 124 | 173 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++G+r+++ g+W+AeI +p+++ +++lg+f +aeeAa+ ++ + +++g MLOC_80875.1 124 QFQGIRQRP-LGKWAAEITHPTKD---VHVWLGTFNSAEEAARCYDVEACRIHG 173 589******.8*********9643...***********************9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 6.02E-17 | 124 | 181 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 2.35E-24 | 124 | 182 | No hit | No description |
PROSITE profile | PS51032 | 19.006 | 124 | 181 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.3E-24 | 124 | 182 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.0E-27 | 124 | 187 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.3E-7 | 125 | 136 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.1E-6 | 125 | 172 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.3E-7 | 147 | 163 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence Send to blast |
MTSARYVPAA IMCGRVPLAN GKISAITRNV MEVTVLPEKK KPVRGSRRDR CFTGHGRRKG 60 LGMDNDEEDF EADFGDSNLE LVRGGVAQKD GTDESLSQDD LSTMPTADFD GPSEMPKTRK 120 RKNQFQGIRQ RPLGKWAAEI THPTKDVHVW LGTFNSAEEA ARCYDVEACR IHGKKAKVNF 180 TEKPTRSADF ASNQPLVPAM NSAAPVEVHI MDMYSDQGSN SFGSYDLGWE YDAKTPDISS 240 IAPTSTIAEG AESALVKNNT YDSMVPHVME NNAVNFQPWM RYLLDDSVDK LIGSLLNFDV 300 PQDTIVNMDL WSFDDMPIGG EFF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcriptional activator that may be involved in defense signaling pathway. Binds in vitro to the DNA sequence 5'-AGCCGCC-3' of the GCC-box element found in pathogenesis-related (PR) gene promoters. The transcriptional activation is enhanced in vitro by the presence of MPK12/BWMK1. {ECO:0000269|PubMed:12913152}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_80875.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020192774.1 | 1e-142 | ethylene-responsive transcription factor 1-like | ||||
Swissprot | Q6K7E6 | 2e-87 | ERF1_ORYSJ; Ethylene-responsive transcription factor 1 | ||||
TrEMBL | M0ZBD9 | 0.0 | M0ZBD9_HORVV; Uncharacterized protein | ||||
STRING | MLOC_80875.1 | 0.0 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1039 | 38 | 134 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47520.1 | 4e-25 | ERF family protein |