PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_79223.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 487aa MW: 54158.9 Da PI: 6.3968 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.7 | 1.9e-11 | 176 | 204 | 5 | 33 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k err+++NReAAr+sR+RKka++++Le+ MLOC_79223.5 176 KTERRLAQNREAARKSRLRKKAYVQQLET 204 88*************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.0E-6 | 172 | 238 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.22 | 174 | 218 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.3E-8 | 174 | 218 | No hit | No description |
SuperFamily | SSF57959 | 6.05E-7 | 176 | 217 | No hit | No description |
Pfam | PF00170 | 8.7E-9 | 176 | 204 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 179 | 194 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 8.5E-28 | 257 | 331 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 487 aa Download sequence Send to blast |
MPKAWILELQ PAAAAYFGEL EEALIHGACA AGVDPVMIES DAHTKSAAAV AGYLAARPPT 60 LEIFPSWPMS HLQRPYSGNS QSVGSTDSSS AQNTMSQAEL VSPVSIRTDS GPRQQQQQQQ 120 QQDQQEVLMV TIDDYNYSQG LGAAPATAQS FQQHAGAQDK RKHGSTKKDG KLVDPKTERR 180 LAQNREAARK SRLRKKAYVQ QLETGRIRLQ QIEQELQRGR SQGLLTGGCS APGEMSSAAV 240 MFDMEYARWL DEDSKYMAEI QGALQAQVLD ANLSTIVEDC MRHYDELFHL RAVLARSDVF 300 HLMTGMWATQ SERCFLWMAG FRPSEILKML IPQLDPSTEQ QLLGMCNLQQ SSEQAEEALS 360 QGLQQLHQSL ADAVGAGPLN DGADVANYAT LMALALDRLD NLESFYRQAD NLRQQTLHHM 420 RRILTTRQTA RCFVSLGEYH RRLRALSSIW ASRPRENLGM AENVSSTAAE FQPIIHHQSQ 480 QNQFSGL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_79223.5 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK370195 | 0.0 | AK370195.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2106J11. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020176121.1 | 0.0 | transcription factor TGAL5-like isoform X4 | ||||
Swissprot | Q6F2N0 | 0.0 | TGAL5_ORYSJ; Transcription factor TGAL5 | ||||
TrEMBL | A0A287G8C3 | 0.0 | A0A287G8C3_HORVV; Uncharacterized protein | ||||
STRING | MLOC_79223.3 | 0.0 | (Hordeum vulgare) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.3 | 1e-127 | bZIP family protein |
Publications ? help Back to Top | |||
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