PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_79223.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 486aa MW: 54087.8 Da PI: 6.3968 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.7 | 1.9e-11 | 175 | 203 | 5 | 33 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k err+++NReAAr+sR+RKka++++Le+ MLOC_79223.4 175 KTERRLAQNREAARKSRLRKKAYVQQLET 203 88*************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.0E-6 | 171 | 237 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.3E-8 | 173 | 217 | No hit | No description |
PROSITE profile | PS50217 | 9.22 | 173 | 217 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.98E-7 | 175 | 216 | No hit | No description |
Pfam | PF00170 | 8.7E-9 | 175 | 203 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 178 | 193 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 8.5E-28 | 256 | 330 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 486 aa Download sequence Send to blast |
MPKAWILELQ PAAAAYFGEL EEALIHGACA AGVDPVMIES DAHTKSAAVA GYLAARPPTL 60 EIFPSWPMSH LQRPYSGNSQ SVGSTDSSSA QNTMSQAELV SPVSIRTDSG PRQQQQQQQQ 120 QDQQEVLMVT IDDYNYSQGL GAAPATAQSF QQHAGAQDKR KHGSTKKDGK LVDPKTERRL 180 AQNREAARKS RLRKKAYVQQ LETGRIRLQQ IEQELQRGRS QGLLTGGCSA PGEMSSAAVM 240 FDMEYARWLD EDSKYMAEIQ GALQAQVLDA NLSTIVEDCM RHYDELFHLR AVLARSDVFH 300 LMTGMWATQS ERCFLWMAGF RPSEILKMLI PQLDPSTEQQ LLGMCNLQQS SEQAEEALSQ 360 GLQQLHQSLA DAVGAGPLND GADVANYATL MALALDRLDN LESFYRQADN LRQQTLHHMR 420 RILTTRQTAR CFVSLGEYHR RLRALSSIWA SRPRENLGMA ENVSSTAAEF QPIIHHQSQQ 480 NQFSGL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_79223.4 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK370195 | 0.0 | AK370195.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2106J11. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020176121.1 | 0.0 | transcription factor TGAL5-like isoform X4 | ||||
Swissprot | Q6F2N0 | 0.0 | TGAL5_ORYSJ; Transcription factor TGAL5 | ||||
TrEMBL | A0A287G8C3 | 0.0 | A0A287G8C3_HORVV; Uncharacterized protein | ||||
STRING | MLOC_79223.3 | 0.0 | (Hordeum vulgare) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.3 | 1e-126 | bZIP family protein |
Publications ? help Back to Top | |||
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