PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_79223.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 488aa MW: 54230 Da PI: 6.3968 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.7 | 1.9e-11 | 177 | 205 | 5 | 33 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k err+++NReAAr+sR+RKka++++Le+ MLOC_79223.1 177 KTERRLAQNREAARKSRLRKKAYVQQLET 205 88*************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.0E-6 | 173 | 239 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.22 | 175 | 219 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.3E-8 | 175 | 219 | No hit | No description |
Pfam | PF00170 | 8.7E-9 | 177 | 205 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.05E-7 | 177 | 218 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 180 | 195 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 8.6E-28 | 258 | 332 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 488 aa Download sequence Send to blast |
MPKAWILELQ PAAAAYFGEL EEALIHGACA AGVDPVMIES DAHTKSAAAA VAGYLAARPP 60 TLEIFPSWPM SHLQRPYSGN SQSVGSTDSS SAQNTMSQAE LVSPVSIRTD SGPRQQQQQQ 120 QQQDQQEVLM VTIDDYNYSQ GLGAAPATAQ SFQQHAGAQD KRKHGSTKKD GKLVDPKTER 180 RLAQNREAAR KSRLRKKAYV QQLETGRIRL QQIEQELQRG RSQGLLTGGC SAPGEMSSAA 240 VMFDMEYARW LDEDSKYMAE IQGALQAQVL DANLSTIVED CMRHYDELFH LRAVLARSDV 300 FHLMTGMWAT QSERCFLWMA GFRPSEILKM LIPQLDPSTE QQLLGMCNLQ QSSEQAEEAL 360 SQGLQQLHQS LADAVGAGPL NDGADVANYA TLMALALDRL DNLESFYRQA DNLRQQTLHH 420 MRRILTTRQT ARCFVSLGEY HRRLRALSSI WASRPRENLG MAENVSSTAA EFQPIIHHQS 480 QQNQFSGL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_79223.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK370195 | 0.0 | AK370195.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2106J11. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020176121.1 | 0.0 | transcription factor TGAL5-like isoform X4 | ||||
Swissprot | Q6F2N0 | 0.0 | TGAL5_ORYSJ; Transcription factor TGAL5 | ||||
TrEMBL | A0A287G8C3 | 0.0 | A0A287G8C3_HORVV; Uncharacterized protein | ||||
STRING | MLOC_79223.3 | 0.0 | (Hordeum vulgare) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.3 | 1e-126 | bZIP family protein |
Publications ? help Back to Top | |||
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