PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_73626.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 180aa MW: 19847.3 Da PI: 8.9669 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.9 | 5.9e-15 | 108 | 160 | 4 | 56 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 ++r+rr++kNRe+A rsR+RK+a+ e e + ++L eN++L+++ + l + + MLOC_73626.1 108 DRRQRRMIKNRESAARSRARKQAYNNEMEAELAQLRRENRMLIQREQDLINVC 160 68*****************************************9988877666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.3E-9 | 105 | 170 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.484 | 107 | 156 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.8E-12 | 108 | 158 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.3E-12 | 108 | 158 | No hit | No description |
CDD | cd14707 | 2.13E-22 | 109 | 156 | No hit | No description |
SuperFamily | SSF57959 | 2.56E-11 | 109 | 161 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 112 | 127 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence Send to blast |
MEELWKGMSL CSTPVALQPY HHLHSPAAAP YRGAGYHQDY LAGAVPQPPR TPPHHTALTL 60 EFTCLGGTGA ANSATSSGDD PAGCHFVFSA SGGGSRRATA VQPAVAGDRR QRRMIKNRES 120 AARSRARKQA YNNEMEAELA QLRRENRMLI QREQDLINVC TYTLTSCYTS FITWYTSFIN |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_73626.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK375836 | 3e-45 | AK375836.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3107H21. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020185454.1 | 4e-82 | bZIP transcription factor 27-like | ||||
TrEMBL | M0YW06 | 1e-133 | M0YW06_HORVV; Uncharacterized protein | ||||
STRING | MLOC_73626.1 | 1e-133 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP14602 | 10 | 20 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 4e-18 | bZIP family protein |