PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_71642.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 136aa MW: 14945.7 Da PI: 10.6165 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 23.2 | 1.5e-07 | 72 | 114 | 21 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 R RKk+++ e ++ v +L+aeN L++e+e+l+ +++l +e+ MLOC_71642.4 72 RSRKKMRLPEVKQMVLSLSAENAVLRQEMESLQMACKALSKEN 114 99*************************************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.3E-5 | 70 | 111 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence Send to blast |
MCQLPLLSFF PLVVGWFHSR FLDSLFLPAA SRKLTTDLAI VLLLPLLQVG SAGGARRPLI 60 MPAPPPRAAG QRSRKKMRLP EVKQMVLSLS AENAVLRQEM ESLQMACKAL SKENGTLEVS 120 ATHAHYYTNL NFSVAA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 71 | 77 | RSRKKMR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_71642.4 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK368410 | 1e-112 | AK368410.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2073D08. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020196993.1 | 3e-33 | uncharacterized protein LOC109782791 | ||||
TrEMBL | A0A287XVL0 | 5e-43 | A0A287XVL0_HORVV; Uncharacterized protein | ||||
TrEMBL | A0A287XVM5 | 6e-45 | A0A287XVM5_HORVV; Uncharacterized protein | ||||
TrEMBL | A0A287XVS1 | 4e-45 | A0A287XVS1_HORVV; Uncharacterized protein | ||||
STRING | MLOC_71642.4 | 1e-94 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3790 | 29 | 51 |