PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_70927.2
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family ERF
Protein Properties Length: 303aa    MW: 32617.1 Da    PI: 7.8059
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_70927.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.42.8e-162576155
           AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                  s+y+GV+++++ grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  MLOC_70927.2 25 SKYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 76
                  89****************988532...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.8E-112576IPR001471AP2/ERF domain
CDDcd000183.18E-242586No hitNo description
SuperFamilySSF541711.63E-182586IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.6E-192685IPR001471AP2/ERF domain
SMARTSM003808.1E-342690IPR001471AP2/ERF domain
PROSITE profilePS5103219.4672684IPR001471AP2/ERF domain
PRINTSPR003678.1E-52738IPR001471AP2/ERF domain
PRINTSPR003678.1E-56686IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MKHMTRQEYI AYLRRNSSGF SRGASKYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTE  60
EEAAEAYDIA AIKFRGLNAV TNFDMSRYDV KTILESSTLP VGGAARRLKE AADHPEAGAT  120
IWRAGMHGGV ISQLTDVGMG AYASYPHGWP TIAFQQPSPL SVHYPYVAQP ARGWCKPEQD  180
ATVAAQNLQD LQQLHLGTAA HNYFQASSSS TVYNGGGYQQ GTGGNAFLMP ATAVMDEQGH  240
SSTATNLGST CSYGDEEGKL NIGYDAMAAM ASTAADPYAA ASTVSIARAN GYSNHWSSPF  300
NGM
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_70927.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020183326.10.0AP2-like ethylene-responsive transcription factor PLT2
TrEMBLA0A287U9I60.0A0A287U9I6_HORVV; Uncharacterized protein
TrEMBLA0A287U9I90.0A0A287U9I9_HORVV; Uncharacterized protein
STRINGMLOC_70927.20.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP156937110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20840.13e-58AP2 family protein