PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_69270.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 261aa MW: 27866.8 Da PI: 5.7056 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.5 | 5.8e-13 | 73 | 124 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 + rrkq+NRe+ArrsR RK a + eLe v +L eN++L +l ++++ MLOC_69270.1 73 RLRRRKQSNRESARRSRSRKAAHLNELEAQVSQLRVENSSLLRRLADVNQKY 124 5679*************************************99998877766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.0E-18 | 69 | 133 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.6E-10 | 71 | 124 | No hit | No description |
PROSITE profile | PS50217 | 11.438 | 71 | 125 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.38E-10 | 73 | 124 | No hit | No description |
Pfam | PF00170 | 1.7E-10 | 73 | 123 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 5.9E-45 | 140 | 254 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence Send to blast |
MTCLAFGHIS GNVVPLQNKL AGGASGVSGP HLVQNADALV KQAASSSSRE QSEDDDMEGE 60 DEITGNGVPT DQRLRRRKQS NRESARRSRS RKAAHLNELE AQVSQLRVEN SSLLRRLADV 120 NQKYNGAAVD NRVLKADVET LRAKVKMAED SVKRVTGMSA LFPAGSDMSS LSMPFTGSPS 180 EATSDAAVPD DLSAYFSTSE AGGNNGYMPE MASSAQEDDN FLNETMDTSK MGRPDSLHRV 240 ASLEHLQKRM CGGPASSGST S |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds to the DNA specific sequence 5'-GCCACGT[AC]AG-3' found in the alpha-globulin gene promoter (PubMed:9049271, PubMed:11572990). Does not bind to promoters of other major storage genes such as glutelin, prolamin and albumin (PubMed:9049271). Binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters (PubMed:11133985). {ECO:0000269|PubMed:11133985, ECO:0000269|PubMed:11572990, ECO:0000269|PubMed:9049271}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_69270.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK360603 | 0.0 | AK360603.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv1121N05. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020172895.1 | 1e-154 | light-inducible protein CPRF2-like | ||||
Swissprot | Q7X9A8 | 1e-118 | RSBZ2_ORYSJ; bZIP transcription factor RISBZ2 | ||||
TrEMBL | A0A287SLV9 | 0.0 | A0A287SLV9_HORVV; Uncharacterized protein | ||||
STRING | MLOC_69270.1 | 0.0 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3488 | 38 | 78 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.1 | 4e-34 | bZIP family protein |
Publications ? help Back to Top | |||
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