PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_68749.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 184aa MW: 19781.9 Da PI: 7.0448 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40 | 8.5e-13 | 88 | 133 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +++rr+++NRe+ArrsR RK+ +++eL +++ L aeN++L el+ MLOC_68749.1 88 RKTRRLASNRESARRSRVRKQRRLDELSSRAARLRAENQRLLVELN 133 689**************************************99987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.5E-11 | 84 | 148 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.6E-9 | 85 | 135 | No hit | No description |
PROSITE profile | PS50217 | 11.024 | 86 | 149 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.45E-9 | 88 | 136 | No hit | No description |
Pfam | PF00170 | 6.5E-10 | 88 | 134 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 91 | 106 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence Send to blast |
MQRHGAACGI ACHSGAGLAA AGVFMLPQVY DPHGVHGQYQ YDLASLSDMV APYTDYNGGN 60 PAVGWVPPGG GAVDDDGRTA CRGNGDERKT RRLASNRESA RRSRVRKQRR LDELSSRAAR 120 LRAENQRLLV ELNGVLAEHG RVARESARLR EEASELRAKL DGMGVDEADV DVAPQSTEDT 180 GNTA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 100 | 106 | RRSRVRK |
2 | 100 | 107 | RRSRVRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_68749.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK365860 | 0.0 | AK365860.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2038F22. | |||
GenBank | AK372147 | 0.0 | AK372147.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2147D05. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020164231.1 | 7e-94 | basic leucine zipper 43-like | ||||
TrEMBL | A0A287TWJ3 | 1e-130 | A0A287TWJ3_HORVV; Uncharacterized protein | ||||
STRING | MLOC_68749.1 | 1e-131 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12742 | 27 | 35 |