 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MLOC_67972.3 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
bHLH |
| Protein Properties |
Length: 54aa MW: 5848.42 Da PI: 4.152 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_67972.3 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 13.9 | 0.0001 | 1 | 18 | 38 | 55 |
STCHHHHHHHHHHHHHHH CS
HLH 38 lsKaeiLekAveYIksLq 55
+sK ++L A+++Ik+Lq
MLOC_67972.3 1 MSKESTLADAIDHIKKLQ 18
59***************9 PP
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that plays a crucial role in tapetum development. Required for male fertility and pollen differentiation within the developing anther. Plays a major role in maintaining tapetum development, starting in early meiosis. Required for pollen mother cell meiosis. May regulate the anther-specific cysteine protease CP1 and lipid-transfer proteins C4 and C6 (PubMed:16141453). Required for anther development. Functions in parallel with GAMYB to regulate early anther development. Functions upstream of the transcription factor TDR and may positively regulate its transcription (PubMed:20590996). {ECO:0000269|PubMed:16141453, ECO:0000269|PubMed:20590996}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT062773 | 2e-43 | BT062773.1 Zea mays full-length cDNA clone ZM_BFb0344I08 mRNA, complete cds. |
| GenBank | BT068494 | 2e-43 | BT068494.1 Zea mays full-length cDNA clone ZM_BFb0227D06 mRNA, complete cds. |
| GenBank | EU959321 | 2e-43 | EU959321.1 Zea mays clone 215950 mRNA sequence. |
| GenBank | KJ726791 | 2e-43 | KJ726791.1 Zea mays clone pUT2277 bHLH transcription factor (bHLH66) mRNA, partial cds. |
