PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_6711.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 283aa MW: 30292.1 Da PI: 10.0143 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.5 | 1.9e-10 | 243 | 269 | 1 | 27 |
XXXXCHHHCHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkae 27 e+e+kre+rkq+NRe+ArrsR+RK+++ MLOC_6711.3 243 EREVKREKRKQSNRESARRSRLRKQQY 269 799***********************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 4.1E-29 | 1 | 92 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Gene3D | G3DSA:1.20.5.170 | 8.9E-7 | 238 | 269 | No hit | No description |
Pfam | PF00170 | 1.3E-8 | 243 | 269 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 2.12E-12 | 248 | 269 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 250 | 265 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence Send to blast |
MAHDEAVSAQ KTGKSGSPPK DQPAPCPYPD WSAMQAYYGS GVMPPAYFAP AIAAGHPPPP 60 YMWGPQHMMP PPFGTPYAMY SHGGAYPHPL VPMMANPLSV EPAKSANSKD KSSNKKLKEI 120 DGSAVSTGSG NSKKTTSSGD YSGEGSSDVN DLKVSGTPRK RSLDGGFDTE ATAAARNKDV 180 VASNPTIRNG TILPNQCFPA PVIKPSVTNV ANSRAIGTPV SPLPGVMAPI HTGISTELSS 240 KDEREVKREK RKQSNRESAR RSRLRKQQYP ILEKGKQYLE TWT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 259 | 265 | RRSRLRK |
2 | 259 | 266 | RRSRLRKQ |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00318 | DAP | Transfer from AT2G46270 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_6711.3 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK249686 | 0.0 | AK249686.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf48a15, mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020151704.1 | 0.0 | common plant regulatory factor 1-like | ||||
Refseq | XP_020151705.1 | 0.0 | common plant regulatory factor 1-like | ||||
TrEMBL | A0A287GNG7 | 0.0 | A0A287GNG7_HORVV; Uncharacterized protein | ||||
STRING | MLOC_6711.2 | 0.0 | (Hordeum vulgare) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46270.2 | 6e-17 | G-box binding factor 3 |