PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_6711.2
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 405aa    MW: 43014.5 Da    PI: 9.7097
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_6711.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.61e-21265327163
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  e+e+kre+rkq+NRe+ArrsR+RK+ae+eeL++ v++L+aeN++Lk+e+ +l k ++kl+ e+
  MLOC_6711.2 265 EREVKREKRKQSNRESARRSRLRKQAETEELATQVESLTAENTSLKSEIGKLAKSSEKLRLEN 327
                  799********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077778.0E-2923114IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1701.9E-16260324No hitNo description
PfamPF001701.4E-20265327IPR004827Basic-leucine zipper domain
SMARTSM003381.2E-21265329IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.07267330IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.06E-11268323No hitNo description
CDDcd147023.31E-21270318No hitNo description
PROSITE patternPS000360272287IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MRQNSLLMKP AYCKTRQVFS EGMAHDEAVS AQKTGKSGSP PKDQPAPCPY PDWSAMQAYY  60
GSGVMPPAYF APAIAAGHPP PPYMWGPQHM MPPPFGTPYA MYSHGGAYPH PLVPMMANPL  120
SVEPAKSANS KDKSSNKKLK EIDGSAVSTG SGNSKKTTSS GDYSGEGSSD VNDLKVSGTP  180
RKRSLDGGFD TEATAAARNK DVVASNPTIR NGTILPNQCF PAPVIKPSVT NVANSRAIGT  240
PVSPLPGVMA PIHTGISTEL SSKDEREVKR EKRKQSNRES ARRSRLRKQA ETEELATQVE  300
SLTAENTSLK SEIGKLAKSS EKLRLENSAL VVKLKGAAAP ADAEMPLDKS AAAAAPSSSP  360
RIVENFLSMI DDTNKSGVNN HMEHSEPKLR QLLGSSTTTD VVAAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1281287RRSRLRK
2281288RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_6711.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2496860.0AK249686.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf48a15, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020151704.10.0common plant regulatory factor 1-like
RefseqXP_020151705.10.0common plant regulatory factor 1-like
TrEMBLM0Y9U50.0M0Y9U5_HORVV; Uncharacterized protein
STRINGMLOC_6711.20.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01120.15e-32G-box binding factor 2