PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_6679.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family BES1
Protein Properties Length: 357aa    MW: 37853.8 Da    PI: 7.8341
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_6679.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822203.65.9e-63151622147
       DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspesslqssl 98 
                  g++r ptw+ErEnn+rRERrRRaiaakiy+GLRa+Gny+lpk++DnneVlkALc+eAGwvve+DGttyr+g+kp+ ++     +sasasp+ss+q   
  MLOC_6679.1  15 GGTRVPTWRERENNRRRERRRRAIAAKIYTGLRAYGNYNLPKHCDNNEVLKALCNEAGWVVEPDGTTYRRGCKPPpQARPDPMRSASASPCSSYQ--- 109
                  789************************************************************************888888999***********... PP

       DUF822  99 kssalaspvesysaspksssfpspssldsislasa.........asllpvlsvlslvs 147
                       +sp++sy++sp+sssfps+ s+++i+l            +sl+p+l++ls+ +
  MLOC_6679.1 110 -----PSPRASYNPSPASSSFPSSGSSSHITLGGGnnfiggvegSSLIPWLKNLSSNP 162
                  .....*************************9987678999999999999999998744 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056879.6E-6815159IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MMHGPAGGSG GHGLGGTRVP TWRERENNRR RERRRRAIAA KIYTGLRAYG NYNLPKHCDN  60
NEVLKALCNE AGWVVEPDGT TYRRGCKPPP QARPDPMRSA SASPCSSYQP SPRASYNPSP  120
ASSSFPSSGS SSHITLGGGN NFIGGVEGSS LIPWLKNLSS NPSFASSSKL PQLHHLYFNG  180
GSISAPVTPP SSSPTHTPRV KTDWENQCVL PPWAGANYTS LPNSTPPSPG HHVAPDPAWL  240
AGFQISSAGP SSPTYNLVSH NPFGIALASS SRACTPGQSG TCSPVMGDHP PVHHDVQMEM  300
VDGAADDFAF GSNSNDNNGS PPGLVKAWEG ERIHEECASD ELELTLGSSR TRGEPPF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A4e-261890372444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B4e-261890372444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C4e-261890372444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D4e-261890372444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay function in brassinosteroid signaling. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_6679.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3601810.0AK360181.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1112F17.
GenBankAK3667940.0AK366794.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2046O02.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020152195.10.0protein BZR1 homolog 3-like
SwissprotQ5Z9E51e-175BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBLA0A287X9180.0A0A287X918_HORVV; Uncharacterized protein
STRINGMLOC_6679.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136638112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.15e-64BES1/BZR1 homolog 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]