PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_66648.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 67aa MW: 7796.94 Da PI: 10.9447 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 49.3 | 1.1e-15 | 1 | 48 | 10 | 57 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++kNRe+A+rsR+RK+a + + e +v +L +eN++L+ + ++lk v+ MLOC_66648.1 1 MIKNRESASRSRARKQAHVTQIESEVHQLREENEQLRLKYDQLKASVE 48 68*****************************************98776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.6E-6 | 1 | 56 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.3E-14 | 1 | 48 | No hit | No description |
Pfam | PF00170 | 3.0E-13 | 1 | 48 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.0E-12 | 1 | 47 | No hit | No description |
PROSITE profile | PS50217 | 10.174 | 1 | 48 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 67 aa Download sequence Send to blast |
MIKNRESASR SRARKQAHVT QIESEVHQLR EENEQLRLKY DQLKASVEVS VPVPVRKTLQ 60 RVLSAPF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_66648.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK373425 | 1e-110 | AK373425.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3030J14. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020151150.1 | 5e-36 | protein ABSCISIC ACID-INSENSITIVE 5-like | ||||
Swissprot | Q84JK2 | 3e-13 | FD_ARATH; Protein FD | ||||
TrEMBL | F2EBA0 | 4e-39 | F2EBA0_HORVV; Predicted protein | ||||
TrEMBL | M0Y874 | 2e-39 | M0Y874_HORVV; Uncharacterized protein | ||||
STRING | BRADI4G36587.1 | 2e-28 | (Brachypodium distachyon) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 1e-15 | bZIP family protein |