PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_65998.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 218aa MW: 24817.5 Da PI: 9.1834 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34 | 6.6e-11 | 39 | 70 | 4 | 35 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekv 35 +k err+++NReAA++sR+RKka++++Le+ MLOC_65998.7 39 SKTERRLAQNREAAKKSRLRKKAYVQNLETSR 70 799*************************9854 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.9E-7 | 36 | 112 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.289 | 38 | 82 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.2E-7 | 38 | 82 | No hit | No description |
SuperFamily | SSF57959 | 1.85E-7 | 39 | 83 | No hit | No description |
Pfam | PF00170 | 1.0E-7 | 40 | 75 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 43 | 58 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 5.5E-31 | 121 | 195 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence Send to blast |
MHTTFALTPY PCFFFFFFLA YFAQRKHGST RKDGKLVDSK TERRLAQNRE AAKKSRLRKK 60 AYVQNLETSR VRLQQMEQEL QRARSQGIFL GGCGAGGDMS PGAAMFDMEY ARWLDDDGKR 120 LAELRGGLQA HLADSNLGAV VEECMQHYDE LFQLKAELAR SDVFHLLTGA WATPAERCFF 180 WMGGFRPSEL LKVIATPYIL LSSSSHALHL HLHLHPHP |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Required for the formation of the blade-sheath boundary in leaves. Promotes flowering. {ECO:0000269|PubMed:9490265}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_65998.7 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK366398 | 0.0 | AK366398.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2042K16. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020190193.1 | 1e-110 | transcription factor LG2-like isoform X4 | ||||
Swissprot | O49067 | 1e-107 | LG2_MAIZE; Transcription factor LG2 | ||||
TrEMBL | A0A287M0I3 | 1e-140 | A0A287M0I3_HORVV; Uncharacterized protein | ||||
STRING | MLOC_65998.3 | 1e-118 | (Hordeum vulgare) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.2 | 3e-78 | bZIP family protein |
Publications ? help Back to Top | |||
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