PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_6534.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 312aa MW: 33888.4 Da PI: 7.667 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.4 | 8.3e-15 | 261 | 303 | 5 | 47 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lkk MLOC_6534.3 261 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLKK 303 79***************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.0E-15 | 254 | 304 | No hit | No description |
SMART | SM00338 | 9.0E-11 | 257 | 312 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.702 | 259 | 304 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.7E-12 | 261 | 303 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 3.05E-25 | 261 | 306 | No hit | No description |
SuperFamily | SSF57959 | 4.25E-11 | 261 | 304 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 264 | 279 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence Send to blast |
MIQAMASQSQ AGGGGTGCYA GPGQREQPQG LARQGSLYSL TLDEVQSQLT EPLLSMNLDE 60 LLKSVFPEGM DPVGGVAGQS EPTLGLHRQG SITMPPELSK KTVDEVWKGI QDSPKRSGEE 120 GSRRRRERQP TFGEMTLEDF LVKAGVVAEG HLKDSMDLPA NMGAIGSSVI AAAAPSLNPG 180 AHWLQQYQQQ TLEPQHPSMA GPFMAGHLGP RPLAVATGAI MESIYPDGQI TSPMLDAHSD 240 PQTPGRKRGA SDGIPDKVVE RRQKRMIKNR ESAARSRARK QAYTNELENK VSRLEEENER 300 LKKQKVICLL FL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 111 | 116 | DSPKRS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00409 | DAP | Transfer from AT3G56850 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_6534.3 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK356892 | 0.0 | AK356892.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1041K12. | |||
GenBank | AK368735 | 0.0 | AK368735.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2078N21. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020181441.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Swissprot | Q9LES3 | 2e-67 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A287G2P5 | 0.0 | A0A287G2P5_HORVV; Uncharacterized protein | ||||
TrEMBL | F2CZ36 | 0.0 | F2CZ36_HORVV; Predicted protein | ||||
STRING | MLOC_6534.1 | 0.0 | (Hordeum vulgare) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 1e-64 | ABA-responsive element binding protein 3 |
Publications ? help Back to Top | |||
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