PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_6534.2
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 331aa    MW: 35997.7 Da    PI: 7.7577
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_6534.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1506.5e-16261310555
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                  +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN++Lkk  +el+ +
  MLOC_6534.2 261 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLKK-QKELEMM 310
                  79****************************************5.4666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.0E-16254306No hitNo description
SMARTSM003383.6E-12257329IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.702259304IPR004827Basic-leucine zipper domain
CDDcd147075.18E-26261315No hitNo description
PfamPF001701.8E-13261304IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.31E-11261306No hitNo description
PROSITE patternPS000360264279IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MIQAMASQSQ AGGGGTGCYA GPGQREQPQG LARQGSLYSL TLDEVQSQLT EPLLSMNLDE  60
LLKSVFPEGM DPVGGVAGQS EPTLGLHRQG SITMPPELSK KTVDEVWKGI QDSPKRSGEE  120
GSRRRRERQP TFGEMTLEDF LVKAGVVAEG HLKDSMDLPA NMGAIGSSVI AAAAPSLNPG  180
AHWLQQYQQQ TLEPQHPSMA GPFMAGHLGP RPLAVATGAI MESIYPDGQI TSPMLDAHSD  240
PQTPGRKRGA SDGIPDKVVE RRQKRMIKNR ESAARSRARK QAYTNELENK VSRLEEENER  300
LKKQKELEMM ITSAPPPEPK YQLRRTSSAP V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111116DSPKRS
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00409DAPTransfer from AT3G56850Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_6534.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3568920.0AK356892.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1041K12.
GenBankAK3687350.0AK368735.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2078N21.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020181441.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES38e-81AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLF2CZ360.0F2CZ36_HORVV; Predicted protein
STRINGMLOC_6534.10.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-77ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]