PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_64644.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | NAC | ||||||||
Protein Properties | Length: 188aa MW: 20628.3 Da PI: 4.0528 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 28.2 | 5.3e-09 | 142 | 183 | 1 | 40 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikev.diy 40 l pGfrF+Ptde++v +yLk+kv + l+ ++ i+e+ +iy MLOC_64644.2 142 LIPGFRFRPTDEDIVLHYLKPKVLNLALRPHSRrIEELaNIY 183 579********************9998554443377765665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.76E-9 | 139 | 172 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 13.061 | 142 | 188 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.5E-6 | 144 | 166 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence Send to blast |
MENATVASSS MYTQLGGNSD NDSPDWRELT FKDTTDKFFG TDLDACPDNI VCSDSNINSH 60 CGATMTTSNN TMVSSSTQLG GSSNDPTSSA AEQPEDGNND HNDDSDSMNS SIITTEHRDV 120 PNEQSTETST EVAETSSTPW QLIPGFRFRP TDEDIVLHYL KPKVLNLALR PHSRRIEELA 180 NIYALFII |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_64644.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020195281.1 | 5e-51 | NAC domain-containing protein 92-like | ||||
TrEMBL | A0A287IT42 | 1e-135 | A0A287IT42_HORVV; Uncharacterized protein | ||||
TrEMBL | A0A287IT79 | 1e-136 | A0A287IT79_HORVV; Uncharacterized protein | ||||
STRING | MLOC_64644.2 | 1e-137 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP29249 | 4 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39610.1 | 3e-07 | NAC domain containing protein 6 |