PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MLOC_64644.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 100aa MW: 11854.6 Da PI: 10.9215 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 43.4 | 1.1e-13 | 11 | 83 | 56 | 128 |
NAM 56 kew..yfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ke +fF++++ ++ + + +t +gyW+ g +v + ++++v k+t+ fy+gr +g++t W m ey+l MLOC_64644.1 11 KERlgFFFVRKQATAYN-NGCFYTTPAGYWRIRGPPSRVRE-GRRTVAFKTTMDFYRGRLLHGRRTPWSMFEYKL 83 33334777776665544.44555789*************99.999****************************98 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 15.96 | 1 | 100 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.4E-13 | 16 | 85 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.3E-6 | 16 | 83 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 100 aa Download sequence Send to blast |
MHAVDEEDGD KERLGFFFVR KQATAYNNGC FYTTPAGYWR IRGPPSRVRE GRRTVAFKTT 60 MDFYRGRLLH GRRTPWSMFE YKLNARLGDF RNLAQPLVRM |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | MLOC_64644.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020195281.1 | 8e-55 | NAC domain-containing protein 92-like | ||||
TrEMBL | M0Y0F2 | 1e-68 | M0Y0F2_HORVV; Uncharacterized protein | ||||
STRING | BRADI5G14950.1 | 1e-31 | (Brachypodium distachyon) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G65910.1 | 2e-12 | NAC domain containing protein 28 |