PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_64597.3
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family G2-like
Protein Properties Length: 479aa    MW: 52803 Da    PI: 10.0925
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_64597.3genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like97.97.2e-31110163255
       G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                   prlrWtp+LH +F++ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+
  MLOC_64597.3 110 PRLRWTPDLHMAFIRAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 163
                   8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.702106166IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.6E-28106164IPR009057Homeodomain-like
SuperFamilySSF466898.6E-14109164IPR009057Homeodomain-like
TIGRFAMsTIGR015574.1E-22110165IPR006447Myb domain, plants
PfamPF002495.1E-9111162IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 479 aa     Download sequence    Send to blast
MITREKEAIV RDVEDKQEVA EPEIVMDNRK RTMNGRKLDL NEDIDMESEQ GEVGDDNDRK  60
EEEEDGGSTT DVAGSRSSSN NSSTNHASET QEGTGAGEHR VRQYNRSKLP RLRWTPDLHM  120
AFIRAVERLG GQERATPKLV LQMMNVRGLS IAHVKSHLQM YRSKKLDHQG QRIRGAISSV  180
FSPMGFHSMR GDRRFHDMLL QRAAALSSTA EHGGFFASRN GGGGGNTTSR LYGILQHHHR  240
PSLIQSGFKN CSFRNQEWAF NHRDRITRKD VKASSTTPHF FASSSVRRWP LGSAVAGAGE  300
QMRDESFGYF TGHGSGQHSR AMPPARSVVP GGGNHRLPFR WHGSDGGKGA QATPSDPVMI  360
AKALDSQQQK HIEQQRALIT PADKVRLPTE TPELELSLSP ATAMDTTDGT PSKKRKKSTA  420
ASSEQELEHC NKLSISPLSL LPPAASMPMQ RKEKTRGGSA EAALGQSTLD LTMSIRALE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A5e-18111163456Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B5e-18111163456Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A4e-18111163355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-18111163355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-18111163355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-18111163355Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A5e-18111163456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C5e-18111163456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D5e-18111163456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F5e-18111163456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H5e-18111163456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J5e-18111163456Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1412416KKRKK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00297DAPTransfer from AT2G38300Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_64597.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020187256.10.0uncharacterized protein LOC109772958 isoform X1
TrEMBLM0Y0820.0M0Y082_HORVV; Uncharacterized protein
STRINGMLOC_64597.20.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.13e-37G2-like family protein