PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_64008.2
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 334aa    MW: 37268.2 Da    PI: 8.4586
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_64008.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.51.9e-104991446
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
                   k+ rr+++NReAAr+sR+RKka++++Le    +L +  ++L+
  MLOC_64008.2 49 QKVLRRLAQNREAARKSRLRKKAYVQQLESSKLKLASLEQELQ 91
                  5899*************************86666666555554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-846109IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.6E-84793No hitNo description
PROSITE profilePS502179.2894892IPR004827Basic-leucine zipper domain
PfamPF001702.0E-75091IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.88E-75093No hitNo description
PROSITE patternPS0003605368IPR004827Basic-leucine zipper domain
PfamPF141443.1E-33132207IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MADASSRTDT SIVVDTDDKN QRMENGQNGA IVPSNSSEPS DRSDRPMDQK VLRRLAQNRE  60
AARKSRLRKK AYVQQLESSK LKLASLEQEL QKARQQGIFI SSSGDQTHAM SGNGAMTFDL  120
EYTRWLEEQN KQINELRTAV NAHASDSDLR LIVDGIMAHY DEIFKLKGAA AKADVFHMLS  180
GMWKTPAERC FLWLGGFRSS ELLKLLVNQL EPLTEQQLMG LSSLEQSSHQ AEDALSQGME  240
ALQQSLAETL AGSLGPSGSS GNVANYMGQM AMAMGKLGTL ENFLRQADNL RQQTLHQMQR  300
ILTIRQAARA LLAIHDYFSR LRALSSLWLA RPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_64008.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX4243170.0JX424317.1 Triticum monococcum TGA-type basic leucine zipper protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020199874.10.0transcription factor TGA2.2 isoform X1
SwissprotQ6IVC30.0TGA22_ORYSJ; Transcription factor TGA2.2
TrEMBLA0A3B6IPQ20.0A0A3B6IPQ2_WHEAT; Glucose-6-phosphate 1-dehydrogenase
TrEMBLA0A446S5630.0A0A446S563_TRITD; Uncharacterized protein
TrEMBLM0XXS70.0M0XXS7_HORVV; Uncharacterized protein
STRINGMLOC_64008.10.0(Hordeum vulgare)
STRINGTraes_4BL_DAFEC95DD.10.0(Triticum aestivum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-149TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Chern M,Fitzgerald HA,Canlas PE,Navarre DA,Ronald PC
    Overexpression of a rice NPR1 homolog leads to constitutive activation of defense response and hypersensitivity to light.
    Mol. Plant Microbe Interact., 2005. 18(6): p. 511-20
    [PMID:15986920]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]