PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_61530.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 395aa MW: 43829.5 Da PI: 7.0907 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.3 | 4.6e-10 | 96 | 136 | 4 | 41 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 k+ rr+++NReAAr+sR+RKka+i++Le k ++Le+e MLOC_61530.6 96 EKVLRRLAQNREAARKSRLRKKAYIQQLESsriKLAQLEQE 136 6899************************9722244444444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.1E-7 | 90 | 141 | No hit | No description |
SMART | SM00338 | 0.0018 | 93 | 146 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.14 | 95 | 139 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.3E-7 | 96 | 134 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.0E-7 | 97 | 140 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 100 | 115 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.6E-26 | 196 | 273 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009409 | Biological Process | response to cold | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 395 aa Download sequence Send to blast |
MTSAQYAPAP LRMGMYERAQ PPQQHQQQQQ QHQLQPVLGM WSSEPYKVDS GGQATSGSSI 60 MEPDAKFDHA GLDEDPQMDE LETAGDADQE ASKPREKVLR RLAQNREAAR KSRLRKKAYI 120 QQLESSRIKL AQLEQELQRA RQQQGVYGGS NPGTSLQRHH GGSAGLGFAA AGQMMDPGVA 180 AFEIKYGHWV DEQKRHTEQL RSALQQGQGT SELELQMMVE TGLANYDDLF RIKGAAAQSD 240 VFCVMSGLWR SPAERFFLWI GGFRPSEVLK ILSPQLHPMT EAQSVAVYGL QLTSAQAEDA 300 LSQGMQKLQQ TLAESLTDPF AAPDAYMVGA VEKLKGLVGF VQQADHLRLE TLQNMHRILT 360 TRQAAKGLLV LGDYFQRLRA LSTLWAARPR ESAIS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00502 | DAP | Transfer from AT5G10030 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_61530.6 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK364746 | 0.0 | AK364746.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2028B19. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020166035.1 | 0.0 | transcription factor TGAL6-like isoform X2 | ||||
Swissprot | A0A0P0WFC8 | 1e-157 | TGAL6_ORYSJ; Transcription factor TGAL6 | ||||
TrEMBL | F2DLH8 | 0.0 | F2DLH8_HORVV; Predicted protein | ||||
STRING | MLOC_61530.2 | 0.0 | (Hordeum vulgare) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10030.2 | 1e-109 | TGACG motif-binding factor 4 |