PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_61490.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 219aa MW: 24036.8 Da PI: 9.9036 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46 | 1.2e-14 | 149 | 191 | 5 | 47 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r +r++kNRe+A rsR+RK+a++ eLe+k+ Le+eN++L++ MLOC_61490.1 149 RRKKRMIKNRESAARSRARKQAYTNELENKISRLEEENQQLRS 191 6899*************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.5E-12 | 145 | 217 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.3 | 147 | 191 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.0E-11 | 149 | 191 | No hit | No description |
CDD | cd14707 | 4.66E-20 | 149 | 190 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.4E-14 | 149 | 191 | No hit | No description |
Pfam | PF00170 | 1.6E-12 | 149 | 191 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 152 | 167 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence Send to blast |
MGTQAMPSGG AISRQGSLCS LTLSDVEGQL HGVNLDDLLR TAGSARKTAD EVWRDIQGGT 60 QMTLEDYLSR PGADAGGAHW AEQYNPAAPV PGQQRHTNVG RPLPRPLGVG AGPVLDALYH 120 DHDHDHDGAT MSGRKRAAAG GPGEKTVERR KKRMIKNRES AARSRARKQA YTNELENKIS 180 RLEEENQQLR SYKAFEPVVH CVPQQEPKNQ LRRRNSASF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 133 | 151 | RKRAAAGGPGEKTVERRKK |
2 | 133 | 152 | RKRAAAGGPGEKTVERRKKR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_61490.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK361423 | 0.0 | AK361423.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1140E18. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020198083.1 | 1e-143 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Swissprot | Q9LES3 | 5e-37 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | F2DC08 | 1e-161 | F2DC08_HORVV; Predicted protein | ||||
STRING | MLOC_61490.1 | 1e-162 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4441 | 33 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 3e-40 | ABA-responsive element binding protein 3 |
Publications ? help Back to Top | |||
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