PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_60894.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 260aa MW: 27538.9 Da PI: 6.4072 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 25.3 | 3.4e-08 | 83 | 126 | 8 | 51 |
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +r NR A r++R++Kka ++ Lee+v L+a Nk+L k+l++ MLOC_60894.1 83 KRPSGNRAAVRKYREKKKAHTALLEEEVVRLKALNKQLLKKLQS 126 55566**********************************99986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.6E-5 | 78 | 143 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 4.5E-13 | 81 | 133 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-6 | 81 | 127 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.1E-12 | 82 | 144 | No hit | No description |
CDD | cd14686 | 7.57E-11 | 88 | 126 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071294 | Biological Process | cellular response to zinc ion | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence Send to blast |
MDDGDLDFSN PEAYLDAAGG GCSMDSYFDG ILNDTEHLAC THTHTCNPPV DDSSHTHTCV 60 HVHTKIVSAS SDDSPAGNGA SKKRPSGNRA AVRKYREKKK AHTALLEEEV VRLKALNKQL 120 LKKLQSHAAL EAEAARLRCL LVDVRGRIEG EIGAFPYQRP AKNVDLVSSG VDQGGFLGSA 180 QVTINSCDFR CNDQMYCNPG MQMRAMGDDG AMSGQMFGQG AGDVANIQCI GSAKSGLTMP 240 PGCGGMGTMP SGCLPSSEKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_60894.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU960633 | 5e-63 | EU960633.1 Zea mays clone 226818 DNA binding protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020168902.1 | 1e-161 | basic leucine zipper 23-like | ||||
TrEMBL | A0A287Q8H3 | 0.0 | A0A287Q8H3_HORVV; Uncharacterized protein | ||||
STRING | MLOC_60894.4 | 0.0 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4175 | 35 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35040.1 | 4e-44 | bZIP family protein |