PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_55173.2
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family ERF
Protein Properties Length: 309aa    MW: 34359.8 Da    PI: 4.6179
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_55173.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.21.3e-1573123155
           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                   s+y+GVr ++ +g+W+AeIrdp+    + +r ++g+f ++e Aa+a++a r++ + 
  MLOC_55173.2  73 SKYPGVRLRS-WGKWAAEIRDPV----SkTRKWIGTFTSEEAAAAAYEAERNRVRA 123
                   89*****998.**********64....44**********88888999988888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.54E-1273104No hitNo description
SuperFamilySSF541712.55E-1473122IPR016177DNA-binding domain
PfamPF008471.7E-873116IPR001471AP2/ERF domain
PROSITE profilePS5103216.96374132IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.7E-1874122IPR001471AP2/ERF domain
SMARTSM003802.7E-1274138IPR001471AP2/ERF domain
PRINTSPR003671.8E-67586IPR001471AP2/ERF domain
PRINTSPR003671.8E-697113IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MMLPSSRKVR ISCCDPDATD SSDEDDRHAK KEKRMTMEVL VPMKSSQVLK SRKTLLPCGT  60
MKSMGTEKKQ PTSKYPGVRL RSWGKWAAEI RDPVSKTRKW IGTFTSEEAA AAAYEAERNR  120
VRAEMLAIKS RPSPSEHEAL SSEATVSCVS SSVSFGDQKA QEVHKVAPME IDPDTADESL  180
LHCSPELPGK EIEVDAFLGR MNVDESLVHC SSTPSDEEIP VDAFHSQINE LPISDYVCTT  240
DKLSLDDISR LADMFHVNDF VDTTGKPPGD DYIGLADISH LPLPMFELDV GLDWEGFDFA  300
SMERELEKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_55173.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020201436.10.0pathogenesis-related genes transcriptional activator PTI6-like
TrEMBLM0WWA00.0M0WWA0_HORVV; Uncharacterized protein
STRINGMLOC_55173.20.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22190.14e-12ERF family protein