PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_53943.4
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family G2-like
Protein Properties Length: 299aa    MW: 31942.5 Da    PI: 11.069
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_53943.4genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like24.27.4e-08280299221
       G2-like   2 prlrWtpeLHerFveaveqL 21 
                   pr+rWt+ LH+rFv+ave L
  MLOC_53943.4 280 PRIRWTTSLHARFVHAVELL 299
                   8****************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.5E-6277299IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009944Biological Processpolarity specification of adaxial/abaxial axis
GO:0048481Biological Processplant ovule development
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MVYGRKDQSI SSILGRPPPS NKLHSPLFHT AHPNRHSCPS PFQVPISLLL LPSSPSSSAP  60
PPTSLPARNL PSSAPQFRPD PFSISLASRK STPAADITPL ALRKLREGSM ELFPSHPDLQ  120
LQLQISPPPA TKPMDLGFWK RALDTTAAAT TAASAAATFA PPSIARTYPS LPAAAGGGFH  180
AGHYGAADGH LGGVQFLQHT QPILHEVQDL AAMKPIRGIP VYNTSHQSLP FLQSQLHHHN  240
HHHQHCYDAI GGAAGGPRSP GKVGALRLAA PPAKRNSRAP RIRWTTSLHA RFVHAVELL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00174DAPTransfer from AT1G32240Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_53943.4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020156179.15e-95probable transcription factor KAN2 isoform X1
RefseqXP_020156180.16e-95probable transcription factor KAN2 isoform X2
RefseqXP_020156181.13e-95probable transcription factor KAN2 isoform X3
TrEMBLA0A453PBV31e-116A0A453PBV3_AEGTS; Uncharacterized protein
STRINGMLOC_53943.20.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17695.19e-10G2-like family protein