PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_51623.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 507aa    MW: 54006 Da    PI: 10.5028
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_51623.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.69.8e-12369421557
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                   kr rr   NR +A +s +RK  +i eLe kv++L++e + L  ++++ kk   
  MLOC_51623.1 369 KRVRRILNNRQSAAKSKERKARYIVELEGKVQVLQGETMNLSAQVKMVKKGQT 421
                   899*******************************************9998655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.3E-11365429IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.588367418IPR004827Basic-leucine zipper domain
PfamPF001702.7E-9369419IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-10369421No hitNo description
SuperFamilySSF579594.43E-10369423No hitNo description
CDDcd147033.57E-19370421No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    Send to blast
MDDDPVHRRR LLPLPGPYGR PRGLPPPPPA AGPIWTPNIR RSVTVHPIIP SPPTSHPVAA  60
DLSSSSSLRR LPPSLRLPPA HPASVASRFV PCFGYSLAPP PAPFPAAASG GSGSHHPRSL  120
SQPQFLSMDF LFRASYPDLA APSAIALSSP PPPPLSSGSD RGPSGLPPPS GSDRMASGLP  180
PLRAGHLRSQ SDVLQGFSYQ PNLPPPAPVN AEALVAANNS TLDGILGAYM STNGLGAVGS  240
SGAVGQERRD QLDSQAPAWS PGDSSENEAE SANGSLPRHC RSLSADSLVG KFKFGPSGLE  300
PSNSDSNLPP PSPGTAAASR LARSGSGSIG GAAALFAKEF ANTKEFSEAD KKVIMDSEHL  360
AQIVLTDPKR VRRILNNRQS AAKSKERKAR YIVELEGKVQ VLQGETMNLS AQVKMVKKGQ  420
TRLSIHNHEM RIRMQALEEQ AQLKNALNEA LNAEVERLKQ LVAEASNHHM PNGSEQGMSS  480
RMIQLHQLQI QRQPSQLQQG QQRQRNF
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_51623.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020180724.10.0transcription factor RF2a-like
TrEMBLA0A287RYM60.0A0A287RYM6_HORVV; Uncharacterized protein
STRINGMLOC_51623.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP148701820
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.35e-40bZIP family protein